Rat lens

Description:
Laboratory rat lens (Wistar strain). *Reference*: Vadim V. Yanshole, Olga A. Snytnikova, Alexey S. Kiryutin, Lyudmila V. Yanshole, Renad Z. Sagdeev, Yuri P. Tsentalovich. Metabolomics of the rat lens: a combined LC-MS and NMR study. Exp. Eye Res. 125 (2014) 71-78.
Property Value
Experiment name Rat lens
Experiment ID 163
Sample groups Wistar lens 3m
Species Rat (Rattus norvegicus)
Tissues Lens
Diseases N/A
Date of creation 10:05, Jul 01, 2021
Date of last modification 17:50, Jun 09, 2023
Author y.tsentalovich
Charts:
Concentration table
Average concentrations of metabolites in groups. Average ± Std.Dev., in nmol per gram of wet tissue (nmol/g).
Metabolites / Groups Wistar lens 3m
Acetic acid 210.4 ± 32.4
ADP 189.4 ± 71.5
Alanine 885.8 ± 131.3
AMP 141.6 ± 10.1
Asparagine 166.6 ± 19.5
ATP 296.2 ± 41.9
Betaine 1745 ± 261.8
Formic acid 1915 ± 766.1
Fumaric acid 6 ± 5.8
Glutamic acid 1923 ± 231.8
Glutamine 924 ± 157.3
GSH 3812.2 ± 337.3
GSSG 514.6 ± 87.8
Histidine 196.4 ± 16.4
Hypotaurine 10259 ± 2871.2
Isoleucine 204.2 ± 26.6
Leucine 427.2 ± 40.8
L-Lactic acid 8050 ± 939.1
Lysine 260.2 ± 65.4
Methionine 392.8 ± 77.3
myo-Inositol 1771 ± 219.2
NAD 300 ± 18.5
Phenylalanine 450.8 ± 42.6
Phosphocholine 5432.2 ± 705.7
Succinic acid 629.6 ± 96.3
Taurine 13196.2 ± 1421.2
Threonine 51.2 ± 7.1
Tryptophan 237.6 ± 21.6
Tyrosine 553.4 ± 59.7
UTP 385.4 ± 81.1
Valine 324.4 ± 28.5
Full concentration table
Concentration of metabolites in samples, in nmol per gram of wet tissue (nmol/g).
Metabolites / Samples 3m2 3m3 3m4 3m5 3m6
Acetic acid 249 227 222 183 171
ADP 160 123 132 257 275
Alanine 805 707 1017 900 1000
AMP 132 133 157 143 143
Asparagine 176 147 196 157 157
ATP 264 250 351 291 325
Betaine 1580 1467 1696 1839 2143
Formic acid 1537 1280 1278 2609 2871
Fumaric acid 9 8 13 0 0
Glutamic acid 1712 1787 1774 2113 2229
Glutamine 1010 800 1161 835 814
GSH 3249 3947 3913 3809 4143
GSSG 527 413 443 561 629
Histidine 176 200 183 209 214
Hypotaurine 6966 9280 8583 12652 13814
Isoleucine 161 200 222 209 229
Leucine 366 413 470 430 457
L-Lactic acid 7098 8027 7213 8583 9329
Lysine 263 160 274 261 343
Methionine 337 347 326 483 471
myo-Inositol 1771 1427 2009 1748 1900
NAD 278 293 300 300 329
Phenylalanine 439 427 404 470 514
Phosphocholine 5078 4840 4904 5896 6443
Succinic acid 512 667 548 678 743
Taurine 11766 13373 12026 13487 15329
Threonine 59 43 45 52 57
Tryptophan 234 227 209 261 257
Tyrosine 483 533 522 600 629
UTP 337 320 339 417 514
Valine 293 307 352 313 357
Metadata
Properties / Samples 3m2 3m3 3m4 3m5 3m6
Group Wistar lens 3m Wistar lens 3m Wistar lens 3m Wistar lens 3m Wistar lens 3m
Description N/A N/A N/A N/A N/A
Species Rat (Rattus norve… Rat (Rattus norve… Rat (Rattus norve… Rat (Rattus norve… Rat (Rattus norve…
Tissue Lens Lens Lens Lens Lens
Diseases N/A N/A N/A N/A N/A
Gender male male male male male
Origin laboratory laboratory laboratory laboratory laboratory
Sample weight, mg 41.0 45.0 46.0 46.0 42.0
Sampling place Institute of Cytology and Genetics SB RAS, Novosibirsk, Russian Federation Institute of Cytology and Genetics SB RAS, Novosibirsk, Russian Federation Institute of Cytology and Genetics SB RAS, Novosibirsk, Russian Federation Institute of Cytology and Genetics SB RAS, Novosibirsk, Russian Federation Institute of Cytology and Genetics SB RAS, Novosibirsk, Russian Federation
Sampling date May 11, 2012 May 11, 2012 May 11, 2012 May 11, 2012 May 11, 2012
Age, months 3 3 3 3 3
Time postmortem, min 10 10 10 10 10
Raw files
File types / Samples 3m2 3m3 3m4 3m5 3m6
MS N/A N/A N/A N/A N/A
NMR N/A N/A N/A N/A N/A
Total size: 0 B
Download *.csv file