Perch lens Borovoe-Nigiya-Ob reservoir

Description:
Comparison of metabolomic compositions of lenses from perch caught in March 2019 in lake Borovoe, river Nigiya and in Ob reservoir. Reference: Tsentalovich, Y.P.; Zelentsova, E.A.; Savina, E.D.; Yanshole, V.V.; Sagdeev, R.Z. Influence of Ecological Factors on the Metabolomic Composition of Fish Lenses. Biology 2022, 11, 1709. https://doi.org/10.3390/biology11121709
Property Value
Experiment name Perch lens Borovoe-Nigiya-Ob reservoir
Experiment ID 119
Sample groups OHL, OOL, OSL
Species European perch (Perca fluviatilis)
Tissues Lens
Diseases N/A
Date of creation 17:52, Jun 03, 2021
Date of last modification 15:47, Dec 15, 2022
Author y.tsentalovich
Charts:
Concentration table
Average concentrations of metabolites in groups. Average ± Std.Dev., in nmol per gram of wet tissue (nmol/g).
Metabolites / Groups OHL OOL OSL
2-Aminobutyric acid 202.6 ± 38.3 169.8 ± 17.6 208.2 ± 22.7
2-Hydroxybutyric acid 19.5 ± 4.6 5.4 ± 1.8 26.2 ± 1.2
Acetic acid 6807.4 ± 1435.0 4512.3 ± 153.6 5432.3 ± 1035.1
Acetylcarnitine 23.0 ± 0.8 21.2 ± 1.7 6.1 ± 1.5
ADP 208.8 ± 16.3 210.5 ± 11.4 168.7 ± 32.1
Alanine 3500.9 ± 318.2 3712.7 ± 216.6 2231.6 ± 155.8
AMP 84.5 ± 27.4 53.5 ± 6.4 89.2 ± 40.6
Asparagine 340.6 ± 27.9 611.9 ± 94.7 380.0 ± 61.8
Aspartic acid 770.3 ± 179.3 732.2 ± 38.4 257.1 ± 44.5
ATP 580.2 ± 63.9 949.7 ± 118.2 485.0 ± 14.0
Betaine 42.3 ± 3.4 69.8 ± 5.7 81.0 ± 9.3
Carnitine 69.9 ± 12.6 109.9 ± 3.8 180.7 ± 19.8
Carnosine 41.1 ± 10.0 68.2 ± 2 60.0 ± 7.3
Choline 278.2 ± 71.4 230.9 ± 11.7 257.2 ± 29.0
Creatine 37.8 ± 1.4 37.8 ± 5.2 12.9 ± 2
Creatinine 54.6 ± 9.6 49.7 ± 8.3 15.5 ± 2.8
Cystine 222.2 ± 10.2 205.8 ± 24.0 165.0 ± 29.5
Formic acid 66.4 ± 18.5 187.0 ± 33.5 45.3 ± 5.6
Fumaric acid 31.3 ± 3.1 21.4 ± 1.7 24.5 ± 2.2
Glucose 227.9 ± 15.7 621.1 ± 13.7 529.7 ± 52.9
Glutamic acid 2778.2 ± 126.4 3444.6 ± 311.4 2125.7 ± 48.2
Glutamine 2717.8 ± 270.0 2636.9 ± 336.8 794.5 ± 192.3
Glycerol 265.4 ± 27.3 94.7 ± 20.7 143.2 ± 25.0
Glycerophosphocholine 158.9 ± 16.9 245.0 ± 39.2 120.9 ± 42.6
Glycine 389.6 ± 24 262.8 ± 51.6 378.2 ± 93.3
GSH 150.2 ± 23.9 338.7 ± 125.4 114.3 ± 8.7
Histidine 755.1 ± 94.2 641.5 ± 18.3 839.4 ± 72.2
Hypoxanthine 106.9 ± 4 82.7 ± 5.8 102.4 ± 8.6
IMP 47.8 ± 1.9 45.6 ± 1.9 36.7 ± 4.8
Isobutyric acid 22.4 ± 4.1 10.3 ± 0.5 10.3 ± 3.3
Isoleucine 238.6 ± 14.2 291.7 ± 30.3 118.6 ± 40
Leucine 862.5 ± 19.4 970.7 ± 78.0 402.1 ± 101.2
L-Lactic acid 3350.5 ± 207.4 1955.0 ± 190.1 2628.1 ± 189.4
Lysine 177.7 ± 7.1 134.6 ± 19.9 120.7 ± 16.7
Methionine 521.5 ± 80.2 542.1 ± 56.5 180.5 ± 33
myo-Inositol 7634.2 ± 399 9052.9 ± 1105.1 5090.3 ± 902.7
N-acetylaspartic acid 2182.2 ± 210.0 2921.0 ± 116.7 1583.1 ± 189.4
N-acetylhistidine 3362.8 ± 810.0 5524.7 ± 452.2 5245.7 ± 858.7
NAD 117.4 ± 5.9 185.8 ± 21.7 144.3 ± 12.1
Ornithine 232.2 ± 7.1 253.2 ± 65.9 69.8 ± 21.4
Ovothiol A 1397.7 ± 143.5 1756.8 ± 199.2 941.9 ± 258.4
Phenylalanine 685.5 ± 131.7 832.2 ± 122.6 262.0 ± 44.1
Phosphocholine 1013.6 ± 134.7 1761.0 ± 207 1062.6 ± 98.4
Phosphocreatine 59.7 ± 9.9 50.8 ± 8.5 14.4 ± 1.9
Proline 230.1 ± 11.5 255.5 ± 45.1 209 ± 41.6
Pyroglutamic acid 256.7 ± 56.8 119.7 ± 9.5 308.4 ± 83.1
Pyruvic acid 14.3 ± 1.5 13.8 ± 2.8 20.9 ± 6.1
Sarcosine 19.5 ± 4.8 21.2 ± 0.8 46.5 ± 12.4
scyllo-Inositol 36.6 ± 12.4 102.4 ± 54.9 27.1 ± 2.3
Serine 1937.1 ± 18.2 2088.2 ± 82.5 1311.5 ± 91.4
Ser-PETA 5247.3 ± 421.8 8226.8 ± 577.6 6685.0 ± 1747.2
Succinic acid 106.4 ± 16.8 83.6 ± 0.9 98.7 ± 12.5
Threonine 1497.7 ± 71.5 1305.4 ± 25.8 1257.4 ± 227.0
Thr-PETA 2494.9 ± 251.1 4135.9 ± 333.0 4846.6 ± 448.1
Tryptophan 490.9 ± 42.1 630.2 ± 84.4 197.5 ± 87.1
Tyrosine 916.8 ± 95.7 935.4 ± 119.7 282 ± 68.0
Valine 368.2 ± 17.8 443.1 ± 51.1 222.6 ± 84.9
Full concentration table
Concentration of metabolites in samples, in nmol per gram of wet tissue (nmol/g).
Metabolites / Samples OHL1 OHL2 OHL3 OHL4 OHL5 OOL1 OOL2 OOL3 OOL4 OOL5 OSL1 OSL2 OSL3 OSL4 OSL5
2-Aminobutyric acid 166.4 325.4 177.9 100.3 243.1 145.5 146.1 69.7 306.8 180.7 153.5 284.8 177.2 222.5 203.1
2-Hydroxybutyric acid 14.2 26.9 14.1 19 23.4 4.1 6.2 2.4 11.5 2.6 25.8 17.4 31.7 28 28.2
Acetic acid 8921.6 8174.1 3794.5 5304.2 7842.8 5220.1 4306.8 4614 4035 4385.7 4471.4 4476.9 4577.1 6547 7089.2
Acetylcarnitine 20.2 34.2 21.4 19.8 19.6 28.9 20.2 18.8 22.1 16.1 4.9 6.9 4 4 10.8
ADP 254.4 214.4 173.7 184.5 217.1 213.3 244.8 218 181 195.2 133.3 197.6 127.2 149 236.2
Alanine 3430.4 3035.9 4620.2 3672.3 2745.8 3647.9 3925.9 3492.7 4180.3 3316.9 1932.4 2417.3 2153.3 2549.3 2105.7
AMP 121.1 72.6 34.4 66.3 128.3 39.2 71.1 54.8 44.9 57.7 44 123 36.3 41.9 200.7
Asparagine 194.3 475.8 374.1 318.4 340.4 726.3 620.3 485.7 519 708.4 301.2 245.4 336.7 424.7 592.2
Aspartic acid 998.7 963 566 604.4 719.6 669.6 859.4 746.5 741.2 644.1 186.4 188.9 180.4 275.3 454.4
ATP 617.8 644.4 516.5 685.2 436.9 1128.3 1142.2 932.7 891.9 653.6 448.6 407.2 452.6 639.8 476.7
Betaine 49.3 40.8 46.2 35.7 39.4 93.3 69.3 71.1 59.7 55.5 79.8 91.9 97.2 73.4 62.8
Carnitine 82.6 52.9 57.3 94.6 62.2 112.7 113.4 142.9 74.8 105.8 175.3 217.5 202.7 144.8 163
Carnosine 31.2 26.9 51.3 59.8 36.5 47.5 91.1 65.4 69.4 67.7 63 64.2 77.7 49.7 45.3
Choline 345.9 311.6 197 196.9 339.7 311.3 234.1 244.4 221.1 143.5 188.6 182.6 199.4 246.7 468.8
Creatine 38.3 38 28.5 40.9 43.1 47 31.9 25.7 42.1 42.3 7.9 14.5 11.2 10.5 20.6
Creatinine 58.1 90.7 36.7 39 48.5 57.5 62.7 41 48.3 38.8 8.9 14.6 8.5 9.2 36.2
Cystine 256.1 216.5 236.9 179 222.5 200.2 200.5 328.6 152.6 146.9 132.1 191.6 132.5 150.5 218.5
Formic acid 76.3 81.3 44.2 40.9 89.4 242.8 222.6 188.4 155.6 125.8 45.7 41.1 29.6 57.8 52.2
Fumaric acid 21.7 35.3 38.5 32 29 20.7 23 26.1 19.6 17.4 19.9 23.5 22.9 29 27.2
Glucose 109.1 261.3 229.9 293.8 245.2 646.6 674 450.1 682.5 652.5 269.4 190 295.9 1757.2 135.9
Glutamic acid 3229 2839.4 2672 2564 2586.7 3833 4042.4 3467 3210.2 2670.3 2010.9 2596.5 1953.9 1985.5 2081.9
Glutamine 3435 2938.5 2398.6 2642.3 2174.7 2456.5 3137.7 3130 2578.2 1882.1 519.3 665.6 601.5 986 1200.3
Glycerol 190.9 136.3 719.1 93.3 187.3 124.7 104.5 114.3 72.9 57 128.3 155.3 105.4 104.8 222.1
Glycerophosphocholine 192.1 169.6 124.1 137.3 171.2 327.7 288.1 266.6 209.8 132.7 83.7 55.5 104.2 168.9 192.1
Glycine 434.4 392.3 502.7 232.1 386.4 308.1 317.1 286.4 204.9 197.4 225.2 761.9 215.8 276.5 411.7
GSH 97.9 94.3 73.3 343.5 142.2 547.8 472.4 109.2 342.7 221.5 111.5 19.8 105.1 122.5 212.5
Histidine 731.4 924.2 648.4 836.7 634.6 610 662.1 625.6 644.2 665.6 869.2 584.6 724.8 755.1 1263.5
Hypoxanthine 103.4 102.4 100.7 110.4 117.4 84 88.3 98.1 76.8 66.5 98.5 89.3 80.4 81.2 162.4
IMP 46.9 40 51.8 50.6 49.9 43.7 47.6 44.7 40.1 51.7 30.4 54.3 23.1 35.8 39.9
Isobutyric acid 26.4 18.1 27.6 22.4 17.7 8.5 10.7 11.3 10 10.9 7.2 4.8 9.4 13.8 16.2
Isoleucine 224.7 253 259.3 208.6 247.6 358.4 316.4 338.8 278.3 166.8 78.4 109.4 74.2 172.7 158.4
Leucine 818.5 805.4 986 845.5 857.2 1081.1 1200.9 1051.2 925 595.5 274.2 406.1 257.7 595.8 476.6
L-Lactic acid 4226.6 3230.3 3472 3057.2 2766.6 2210.7 1723.3 2103.6 2015.6 1721.9 2457.1 2941.8 2835.8 2368.2 2537.4
Lysine 195.8 181.6 181.9 131.3 197.9 113.5 170.3 153.3 107 129 115.8 95.4 104.6 138 149.6
Methionine 631.2 587.2 421.9 426.8 540.5 500.1 885.7 519.5 398.9 406.5 105 169.6 76.5 171 380.6
myo-Inositol 6975.2 9021.3 7070.4 7868.4 7235.9 9886.5 7552.2 10439 9710.5 7676.3 4736.2 6424.3 3582.3 4451.7 6257
N-acetylaspartic acid 2543.7 2325.9 1906 1886.2 2249 3145.4 3190.1 2912 3025.7 2332 1300.6 1307.6 1326.6 1686.4 2294.5
N-acetylhistidine 2822.2 2539.3 4987.5 4159.4 2305.5 5153.9 6329.7 4788.5 6058.2 5293.2 6155.6 6620.8 5638 4438.3 3375.8
NAD 128.5 116.7 119.7 136.9 85 219.9 206.2 191 162.8 149 135.2 138.3 127.8 161.1 159.3
Ornithine 210.9 374.4 148.8 220.6 206.4 324.4 319.2 170.8 264.3 187.5 45.9 73.4 30.6 21.1 177.9
Ovothiol A 1815.6 1546.7 1274.9 1091.8 1259.7 1903.6 2379.7 1544.9 1450.8 1505.2 811.5 672.8 695.5 1212.3 1317.5
Phenylalanine 918.5 815.7 552.3 552.3 588.9 841.8 1017.5 1031.5 772.2 497.9 175.4 263.6 138.5 205.4 526.9
Phosphocholine 1098.1 828.6 1059.2 1258.1 824.2 2163.3 1907.8 1763.6 1493.8 1476.4 837.5 1139.9 943.2 1116.8 1275.6
Phosphocreatine 64.2 93.1 42.1 44.4 54.9 57.4 69.2 39.8 47.3 40.5 8.8 12.7 8 10 32.3
Proline 240.4 217.4 265.3 190.8 236.4 313 306.1 274.3 215.9 168.4 160.5 166.1 214.1 255 249.3
Pyroglutamic acid 347.8 317.2 203.6 215.8 199.1 126.8 130.9 136.2 92.6 112 194 596.6 223.2 168.1 360.2
Pyruvic acid 13.2 16.2 14.9 16.7 10.5 18.7 9.5 16.9 12.8 11.3 15.9 13.7 17.2 28.1 29.8
Sarcosine 21 12 21.9 30.2 12.3 26.4 20.6 21.8 22.3 15 48.2 94.7 43.2 23.5 22.7
scyllo-Inositol 28.2 29.3 53 53.5 18.9 157.4 62.8 202.4 41.8 47.7 22.7 23 17.4 27.2 45
Serine 1810.6 2048.4 1958.6 1945.6 1922.2 1921.7 2899.9 1711.1 1871.7 2036.8 1257.6 1380.7 1197.9 1751.5 969.9
Ser-PETA 5217.7 5059.4 5902.9 6173.5 3882.8 8560.2 10449.1 7464.3 7255.3 7405 8118.6 8554.5 7641.5 4486.1 4624.2
Succinic acid 119 85.5 138.3 115.8 73.4 84.3 84.2 90.2 85.9 73.2 89 138.1 89.7 62.6 113.9
Threonine 1662.5 1489.4 1490.6 1213.3 1632.5 1624.4 1265.6 1214 1260.5 1162.7 992 1341.2 1445.9 1669.2 838.5
Thr-PETA 2806 2478.6 2747.6 2245.3 2197.1 5432.7 4287.6 4003.9 3621.6 3333.6 5240.6 5133.4 6060.2 4344.5 3454.5
Tryptophan 639.4 518.2 357.1 505.6 434 574.9 863.4 743.8 607.6 361.4 147.9 86.6 130.9 317 305
Tyrosine 886.7 1502.3 695.3 661.1 838.6 1028.6 1118.3 789.2 978.4 762.4 207.7 323.3 157.2 187.4 534.4
Valine 345.9 381.5 372.3 323.3 417.8 552.5 443.7 529.7 427.6 261.9 138.3 187 135.4 308.1 344.2
Metadata
Properties / Samples OHL1 OHL2 OHL3 OHL4 OHL5 OOL1 OOL2 OOL3 OOL4 OOL5 OSL1 OSL2 OSL3 OSL4 OSL5
Group OHL OHL OHL OHL OHL OOL OOL OOL OOL OOL OSL OSL OSL OSL OSL
Description N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Species European perch (P… European perch (P… European perch (P… European perch (P… European perch (P… European perch (P… European perch (P… European perch (P… European perch (P… European perch (P… European perch (P… European perch (P… European perch (P… European perch (P… European perch (P…
Tissue Lens Lens Lens Lens Lens Lens Lens Lens Lens Lens Lens Lens Lens Lens Lens
Diseases N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gender Not specified Not specified Not specified Not specified Not specified Not specified Not specified Not specified Not specified Not specified Not specified Not specified Not specified Not specified Not specified
Origin wild wild wild wild wild wild wild wild wild wild wild wild wild wild wild
Sample weight, mg 61.0 60.4 150.0 96.7 56.3 89.2 87.7 82.0 87.3 113.4 135.5 140.0 135.1 84.9 85.7
Sampling place river Nigiya, Tomsk region, Russia river Nigiya, Tomsk region, Russia river Nigiya, Tomsk region, Russia river Nigiya, Tomsk region, Russia river Nigiya, Tomsk region, Russia Ob reservoir, Novosibirsk area, Russia Ob reservoir, Novosibirsk area, Russia Ob reservoir, Novosibirsk area, Russia Ob reservoir, Novosibirsk area, Russia Ob reservoir, Novosibirsk area, Russia Lake Borovoe, Tomsk region, Russia Lake Borovoe, Tomsk region, Russia Lake Borovoe, Tomsk region, Russia Lake Borovoe, Tomsk region, Russia Lake Borovoe, Tomsk region, Russia
Sampling date March 14, 2019 March 14, 2019 March 14, 2019 March 14, 2019 March 14, 2019 March 9, 2019 March 9, 2019 March 9, 2019 March 9, 2019 March 9, 2019 March 11, 2019 March 11, 2019 March 11, 2019 March 11, 2019 March 11, 2019
Environmental factors Low oxygen Low oxygen Low oxygen Low oxygen Low oxygen Pollution Pollution Pollution Pollution Pollution Clean water Clean water Clean water Clean water Clean water
Time postmortem, min 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10
Raw files
File types / Samples OHL1 OHL2 OHL3 OHL4 OHL5 OOL1 OOL2 OOL3 OOL4 OOL5 OSL1 OSL2 OSL3 OSL4 OSL5
MS N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
NMR
Total size: 0 B
Download *.csv file